Citation: | RUI Xiang-yun, CHEN Jin-zhi, HUANG Peng-rong, YANG Guang. Discovery and Mechanisms of DNA Interference[J]. Fujian Journal of Agricultural Sciences, 2017, 32(4): 456-460. doi: 10.19303/j.issn.1008-0384.2017.04.019 |
[1] |
OGONI C. Homology-dependent gene silencing mechanisms in fungi[J]. Annual Reviews in Microbiology, 2001, 55(1): 381-406. doi: 10.1146/annurev.micro.55.1.381
|
[2] |
MEYER P, SAEDLER H. Homology-dependent gene silencing in plants[J]. Annual review of plant biology, 1996, 47(1): 23-48. doi: 10.1146/annurev.arplant.47.1.23
|
[3] |
VAYSSIÉ L, VARGAS M, WEBER C, et al. Double-stranded RNA mediates homology-dependant gene silencing of γ-tubulin in the human parasite Entamoeba histolytica[J]. Molecular and biochemical parasitology, 2004, 138(1): 21-28. doi: 10.1016/j.molbiopara.2004.07.005
|
[4] |
JENSEN S, GASSAMA M P, HEIDMANN T. Taming of transposable elements by homology-dependent gene silencing[J]. Nature genetics, 1999, 21(2): 209-212. doi: 10.1038/5997
|
[5] |
BAUM J A, BOGAERT T, CLINTON W, HECK G R, et al. Control of coleopteran insect pests through RNA interference[J]. Nature Biotechnology, 2007, 25 (11), 1322-1326. doi: 10.1038/nbt1359
|
[6] |
HAMMOND S M, CAUDY A A, HANNON G J. Post-transcriptional gene silencing by double-stranded RNA[J]. Nature Reviews Genetics, 2001, 2(2): 110-119. doi: 10.1038/35052556
|
[7] |
VOINNET O, VAIN P, ANGELL S, et al. Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA[J]. Cell, 1998, 95(2): 177-187. doi: 10.1016/S0092-8674(00)81749-3
|
[8] |
PALAUQUI J C, BALZERGUE S. Activation of systemic acquired silencing by localised introduction of DNA[J]. Current Biology, 1999, 9(2): 59-66. doi: 10.1016/S0960-9822(99)80016-5
|
[9] |
CRETE P, LEUENBERGER S, IGLESIAS V A, et al. Graft transmission of induced and spontaneous post-transcriptional silencing of chitinase genes[J]. Plant Journal, 2001, 28(5): 493-501. doi: 10.1046/j.1365-313X.2001.01171.x
|
[10] |
KAWAI-TOYOOKA H, KURAMOTO C, ORUI K, et al. DNA Interference: a Simple and Efficient Gene-Silencing System for High-Throughput Functional Analysis in the Fern Adiantum[J]. Plant and Cell Physiology, 2004, 45(11): 1648-1657. doi: 10.1093/pcp/pch186
|
[11] |
RUTHERFORD G, TANURDZIC M, HASEBE M, et al. A systemic gene silencing method suitable for high throughput, reverse genetic analyses of gene function in fern gametophytes[J]. BMC Plant Biology, 2004, 4(1):6. doi: 10.1186/1471-2229-4-6
|
[12] |
BAHRAMIAN M B, ZARBL H. Transcriptional and posttranscriptional silencing of rodent alpha1(I) collagen by a homologous transcriptionally self-silenced transgene[J]. Molecular Cell Biology, 1999, 19(1): 274-283. doi: 10.1128/MCB.19.1.274
|
[13] |
任新瑜, 梁智勇, 师晓华, et al.同源无启动子DNA片段抑制人胰腺癌细胞株整合基因的表达[J].中华病理学杂志, 2007, 36(8):539-543. http://www.cnki.com.cn/Article/CJFDTOTAL-ZHBL200708011.htm
|
[14] |
任新瑜. 同源无启动子DNA片段对人胰腺癌细胞外源性整合基因及内源性基因的序列特异性抑制[D]. 北京: 中国医学科学院和中国协和医科大学, 2007.
|
[15] |
OMOTEZAKO T, ONUMA T A, NISHIDA H. DNA interference: DNA-induced gene silencing in the appendicularian Oikopleura dioica[J]. Proceedings of the Royal Society B-Biological Sciences, 2015, 282(1807): doi.org/10.1098/rspb.2015.0435. http://www.ncbi.nlm.nih.gov/pubmed/25904672
|
[16] |
GAO F, SHEN X Z, JIANG F, et al. DNA-guided genome editing using the Natronobacterium gregoryi Argonaute[J]. Nature Biotechnology, 2016: doi:10.1038/nbt.3547.
|
[17] |
QI J, DONG Z, SHI Y, et al. NgAgo-based fabp11a gene knockdown causes eye developmental defects in zebrafish[J]. Cell Research, 2016, 26(12): 1349-1352. doi: 10.1038/cr.2016.134
|
[18] |
SUNGHYEOK Y, TAEGEUN B, KYOUNGMI K, et al. DNA-dependent RNA cleavage by the Natronobacterium gregoryi Argonaute[J]. bioRxiv, 2017: doi.org/10.1101/101923.
|
[19] |
SWARTS D C, JORE M M, WESTRA E R, et al. DNA-guided DNA interference by a prokaryotic Argonaute[J]. Nature, 2014: 507(7491): 258. doi: 10.1038/nature12971
|
[20] |
OLOVNIKOV I, CHAN K, SACHIDANANDAM R, et al. Bacterial argonaute samples the transcriptome to identify foreign DNA[J]. Molecular Cell, 2013, 51(5): 594-605. doi: 10.1016/j.molcel.2013.08.014
|
[21] |
RASHID U J, PATEROK D, KOGLIN A, et al. Structure of Aquifex aeolicus argonaute highlights conformational flexibility of the PAZ domain as a potential regulator of RNA-induced silencing complex function[J]. Journalof Biological Chemistry, 2007, 282(18): 13824-13832. doi: 10.1074/jbc.M608619200
|
[22] |
YUAN Y R, PEI Y, MA J B, et al. Crystal structure of A.aeolicus argonaute, a site-specific DNA-guided endoribo-nuclease, provides insights into RISC-mediated mRNA cleavage[J]. Molecular Cell, 2005, 19(3): 405-419. doi: 10.1016/j.molcel.2005.07.011
|
[23] |
WANG Y, SHENG G, JURANEK S, et al. Structure of the guide-strand-containing argonaute silencing complex[J]. Nature, 2008, 456(7219): 209-213. doi: 10.1038/nature07315
|
[24] |
Swarts D C, Szczepaniak M, Sheng G, et al. Autonomous Generation and Loading of DNA Guides by Bacterial Argonaute[J]. Molecular Cell, 2017, 65(6): 985-998. e6. doi: 10.1016/j.molcel.2017.01.033
|
[25] |
SWARTS D C, HEGGE J W, HINOJO I, et al. Argonaute of the archaeon Pyrococcus furiosus is a DNA-guided nuclease that targets cognate DNA[J]. Nucleic Acids Research, 2015, 43(10): 5120-5129. doi: 10.1093/nar/gkv415
|
[26] |
ASHE H L, MONKS J, WIJGERDE M, et al. Intergenic transcription and transinduction of the human beta-globin locus[J]. Genes and Development, 1997, 11(19): 2494-2509. doi: 10.1101/gad.11.19.2494
|
[27] |
HELLEDAY T, ARNAUDEAU C, JENSSEN D. Effects of carcinogenic agents upon different mechanisms for intragenic recombination in mammalian cells[J]. Carcinogenesis, 1998, 19(6): 973-978. doi: 10.1093/carcin/19.6.973
|
[28] |
MOREL J B, MOURRAIN P, BECLIN C, et al. DNA methylation and chromatin structure affect transcriptional and post-transcriptional transgene silencing in Arabidopsis[J]. Current Biology, 2000, 10(24): 1591-1594. doi: 10.1016/S0960-9822(00)00862-9
|
[29] |
FURNER I J, SHEIKH M A, COLLETT C E. Gene silencing and homology-dependent gene silencing in Arabidopsis: genetic modifiers and DNA methylation[J]. Genetics, 1998, 149(2): 651-662. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1460166/
|
[30] |
ROCHA P S C F, SHEIKH M, MELCHIORRE R, et al. The Arabidopsis HOMOLOGY-DEPENDENT GENE SILENCING1 gene codes for an S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing[J]. The Plant Cell, 2005, 17(2): 404-417. doi: 10.1105/tpc.104.028332
|